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课程介绍:
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' ^8 w; ?- d7 p2 v: G- z5 b: C1 G北大生物信息学课程，中文讲解，但是是英文的教材4 |& u! Z5 }& [! W6 M U
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课程目录:! ~0 i& ?, Y7 I8 b0 ]/ B
0 }) B3 t4 B; p- L1 - 1 - 1-1-1 What is bioinformatics (chinese version) 什么是生物信息学(中文版) [16-05].mp47 d+ U9 J! l; Z3 s' ~
2 - 1 - 1-2-1 Essential Concepts (chinese version) 序列比对中的基本概念(中文版) [17-02].mp4
7 [; m* z; E+ A1 n" C2 - 3 - 1-2-2 Global Alignment by Dynamic Programming (chinese version) 利用动态规划进行全局比对(中文版) [15-20].mp45 h* ^( i, [: k7 d. M0 @
2 - 9 - 1-2-S1 - Supplement on Homology & Similarity, Similarity Matrix and Dot Matrix 关于同源、相似性、相似性矩阵和点阵图的补充材料 [10-17].mp4* H/ X5 Y3 w# n0 C8 T
2 - 10 - 1-2-S2 - Interview with M. S. Waterman Waterman访谈 [29-35].mp4: B3 W4 n. c. I; ^
2 - 11 - 1-2-S3 - Student presentation 学生课堂报告 [18-15].mp4
" O/ x5 E( f6 Z, t7 b6 `4 t7 L, L3 - 1 - 2-1-1 Sequence Databases (chinese version) 序列数据库 (中文版) [10-19].mp4
6 O1 U7 p# `4 l% ~% _4 I: j3 n1 Y3 - 3 - 2-1-2 BLAST Algorithm- a Primer (chinese version) BLAST算法初探 (中文版) [10-58].mp4$ T2 |1 R( F) Z: {! r. B
4 - 1 - 2-2-1 Ontology and Gene Ontology (chinese version) 本体论和基因本体论 (中文版) [22-24].mp4
0 f5 Q- f, u( B6 |! j* A3 `4 - 3 - 2-2-2 KEGG Pathway Database (chinese version) KEGG分子通路数据库 (中文版) [08-00].mp4" Y9 i& q& u( k K
4 - 5 - 2-2-3 Annotations in Gene Ontology (chinese version) GO注释 (中文版) [07-14].mp4/ P9 v0 s; @" m c$ S! D/ n
4 - 7 - 2-2-4 Pathway Identification (chinese version) 分子通路鉴定 (中文版) [18-10].mp4
, y* b6 X$ t- v3 t4 - 9 - 2-2-5 An Application- Common Molecular Pathways Underlying Addiction (chinese version) 应用：药物成瘾共同分子通路的鉴定 (中文版) [06-05].mp4- G3 P- c# ?: a
4 - 12 - 2-2-S2 - KOBAS Demo KOBAS演示 [07-32].mp4
9 J( f- y, J( B4 - 13 - 2-2-S3 - Student presentation on KOBAS 学生演示KOBAS [09-02].mp4" D, b3 b2 G% V; S* m9 z
5 - 1 - 3-1-1 From States to Markov Chain (chinese version) 从状态到马尔可夫链 (中文版) [07-13].mp40 c4 @+ g6 s9 U) e+ h
5 - 3 - 3-1-2 Hidden Markov Model (chinese version) 隐马尔可夫模型 (中文版) [09-32].mp4
+ l* t0 m! @( r" W5 - 5 - 3-1-3 Predict with Hidden Markov Model (chinese version) 用隐马尔可夫模型建立预测模型 (中文版) [08-36].mp43 E: z) q( W, u, z( h8 Y
5 - 7 - 3-1-S1 - Student presentation 学生课堂报告 [16-33].mp4 @! o, n! w/ Q5 v% M, g/ L/ o
6 - 1 - 3-2-1 Overview of Resources (chinese version) 生物信息资源概览 (中文版) [16-52].mp40 l" d2 b0 Q# ]3 X- K+ S8 ^+ `' a
6 - 3 - 3-2-2 National Center for Biotechnology Information (chinese version) 美国国家生物信息中心(NCBI)资源 (中文版) [11-05].mp4* F) i2 _6 N9 ]2 p: o1 T# h, z
6 - 5 - 3-2-3 European Bioinformatics Institute (chinese version) 欧洲生物信息中心(EBI)资源 (中文版) [10-50].mp4
. i* I# _, s: C7 a6 - 7 - 3-2-4 UCSC Genome Browser (chinese version) UCSC基因组浏览器 (中文版) [05-28].mp4' M! @6 C! K5 ]8 N c$ v6 I& R0 C
6 - 9 - 3-2-5 Individual Resources (chinese version) 其他主要生物信息资源 (中文版) [05-17].mp4- a# f4 p. A- x: G* } O
6 - 11 - 3-2-S1 - Student presentation on CBI resources 学生介绍CBI资源 [08-54].mp4
. k( c) v8 L D2 y! R, Q7 - 1 - 4-1-1 From Sequencing to NGS (chinese version) 新一代测序 (中文版) [09-04].mp4
, C/ D$ O& m' N7 - 3 - 4-1-2 Reads Mapping and Variants Calling (chinese version) 序列回帖和变异鉴定 (中文版) [13-59].mp4% i& ^" Q6 q1 l+ b# u8 v
7 - 5 - 4-1-3 Computer Lab- Reads mapping and variant calling 序列回帖和变异鉴定的分析演示 [07-48].mp4
0 M7 m2 C7 x1 A" h7 - 6 - 4-1-S1 - Supplement on reads mapping and variant calling 关于回帖、变异鉴定的补充材料 [09-19].mp4
" C; x' ?/ Y( U2 t! e7 - 7 - 4-1-S2 - Supplement on genotyping 关于基因型鉴定的补充材料 [18-24].mp4
: Y8 [4 n8 ~0 j3 c7 H: Q2 A8 J7 - 8 - 4-1-S3 - A quick tour to sequencer 1 - Ion Torrent PGM Ion Torrent PGM测序介绍 [10-48].mp4/ r! ]# L8 _- s* |: b; w) y1 s
7 - 9 - 4-1-S4 - A quick tour to sequencer 2 - 3730 Sanger sequencing 3730 Sanger测序介绍 [03-51].mp4$ o2 n6 C, m4 B* ~
7 - 10 - 4-1-S5 - Student presentation 学生课堂报告 [09-41].mp4
' q9 s2 Z m3 l+ d9 o) G8 - 1 - 4-2-1 Overview of the problem (chinese version) 问题概述 (中文版) [16-28].mp4' B3 i( j+ H- g2 n% o
8 - 3 - 4-2-2 Variant Databases (chinese version) 记录变异的数据库 (中文版) [11-14].mp4 r. C- X& U2 a8 V2 y
8 - 5 - 4-2-3 Conservation-based and Rule-based methods- SIFT & PolyPhen (chinese version) 基于保守性和规则的预测方法：SIFT和PolyPhen (中文版) 21-52 _0 h1 Z! W$ G; f
8 - 7 - 4-2-4 Classifier-based methods- SAPRED (chinese version) 基于机器学习分类器的预测方法：SAPRED (中文版) [17-28].mp4
8 ]9 n( Q2 V5 g" S5 B% M9 V8 - 9 - 4-2-S1 - Introduction to Support Vector Machine(SVM) 支持向量机简介 [18-25].mp4
0 ]8 y. h+ S, H J* b* E5 |! s6 g8 - 10 - 4-2-S2 - Student presentation 学生课堂报告 [14-12].mp42 t: B1 y0 q7 E5 ^% T; a) s1 A
9 - 1 - 5-1-1 Transcriptome- An Overview (chinese version) 转录组介绍 (中文版) [11-55].mp4
8 N! k7 ?( O$ V* e9 @9 - 3 - 5-1-2 RNA-Seq- Mapping & Assembling (chinese version) RNA测序数据回贴与组装 (中文版) [10-58].mp4
# z0 z9 V8 L+ \9 - 5 - 5-1-3 Computer Lab- RNA-seq Data Analysis RNA-seq数据分析 [22-02].mp4. s# g8 W2 Q8 e" L5 N9 @) U
9 - 6 - 5-1-S1 - Dr. Maynard Olson Talk Maynard Olson教授访谈 [09-42].mp4
7 l5 m5 \" u! K0 l; {9 - 7 - 5-1-S2 - Student presentation 学生课堂报告 [11-33].mp4
" M( }8 ]! t( v8 [10 - 1 - 5-2-1 From Information to Knowledge (chinese version) 从信息到知识 (中文版) [09-17].mp4
% k2 @7 Q c4 t2 v$ G10 - 3 - 5-2-2 Data Mining- Identify long ncRNAs (chinese version) 数据挖掘- 长非编码RNA的鉴定 (中文版) [09-14].mp4( z9 x2 G" ?! Z, |5 n6 N4 a+ t+ |
10 - 5 - 5-2-3 Data Mining- Differential Expression and Clustering (chinese version) 数据挖掘- 差异表达与聚类分析 (中文版) [10-30].mp4& r$ n4 v3 `( k3 K& R& t
10 - 7 - 5-2-S1 - Feature selection and Clustering 变量选择与聚类分析 [14-48].mp4
! [' d& _3 ^% |9 J" v4 Y4 |( p% ?10 - 8 - 5-2-S2 - A quick tour to sequencer - illumina Hiseq & Miseq illumina Hiseq & Miseq测序仪介绍 [13-49].mp47 a2 a% ^8 r+ y
10 - 9 - 5-2-S3 - Student presentation 学生课堂报告 [10-46].mp46 r+ r1 F( o9 {: O) _4 f- ]7 |
11 - 1 - 6-1-1 New Gene Evolution Detected by Genomic Computation- Basic Concepts and Examples (chinese version) 新基因鉴定及演化分析- 概念与实例 (中文版) [32-37].mp4
5 m% g/ G1 m j3 n* `2 O11 - 5 - 6-1-3 A Human-Specific de novo Gene Associated with Addiction (chinese version) 一个与成瘾相关的人类特异的从头起源的新基因 (中文版) [11-30].mp4
4 o( M+ [- E$ _11 - 7 - 6-1-4 Origination of de novo Genes from Noncoding RNAs (chinese version) 从非编码RNA起源的从头起源新基因 (中文版) [18-52].mp48 K! ]. j& K6 j4 V+ O; u: D( V( N
11 - 9 - 6-1-S1 - Student presentation 学生课堂报告 [12-21].mp4( h" }# U/ e) T& H# o, {3 f) q j
12 - 1 - 6-2-1 From Dry to Wet, an Evolutionary Story Part1 (chinese version) 从干实验到湿实验——一个演化问题 第1部分 (中文版) [07-09].mp4
$ X8 q5 O; [( F/ l7 \& J12 - 3 - 6-2-2 Project background introduction by Dr. Gang Pei 裴钢教授关于研究背景的介绍 [25-23].mp4, L2 _/ L8 s! L$ E
12 - 4 - 6-2-3 From Dry to Wet, an Evolutionary Story Part2 (chinese version) 从干实验到湿实验——一个演化问题 第2部分 (中文版) [07-21].mp4; M, o/ q% d# l9 B7 V
12 - 6 - 6-2-S1 - Talk with Dr. Gang Pei 裴钢教授访谈 [20-19].mp4* ]- h* U4 B: I/ S: x2 t8 W
12 - 7 - 6-2-S2 - Student presentation 学生课堂报告 [10-14].mp4$ n) c- e; ~' n& S2 Q! M
2 - 7 - 1-2-4 Alignment with affine gap penalty and calculation of time complexity of the Needleman-Wunsch algorithm (chinese version) 考虑仿射空位罚分的序列比对，以及如何计算Needlema( W+ N& u H: X& M N4 R
11 - 3 - 6-1-2 New Gene Evolution Detected by Genomic Computation- A Driver for Human Brain Evolution (chinese version) 新基因鉴定及演化分析- 大脑演化的驱动力 (中文版) [13-15].mp4; }' R: w3 \- W' c D
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发表于 2022-6-23 08:00:01
